PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_20905.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 521aa    MW: 56626 Da    PI: 3.8668
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_20905.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.17.9e-11127102128
           NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                   +kktLvf+ grapkg +t+Wvmheyrl
  MLOC_20905.1   1 MKKTLVFHAGRAPKGDRTNWVMHEYRL 27 
                   8************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.23E-14145IPR003441NAC domain
PROSITE profilePS5100521.073145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MKKTLVFHAG RAPKGDRTNW VMHEYRLLDN DGPQDMHVVC RIFQKVGSGP QNGAQYGAPY  60
MEEEWEDEDD AIENTPTSGT STEMLAITDT ASAESNVEDE NIFSGINELV QIQDVLIPPE  120
IVAPIQAIAP LQAQGLNGTG MGSYADGDVS LDEILQEPVS DVSVDNTGEP EEQSPIDDHF  180
SLADLSGCPN QDDGYVRQAG LTMWSDPSNG DQAYYPIIRT YGNRNHANMA LSDAEYFDTE  240
NDTNAYFGQQ QACPSDDQNL YSGQQQACPS DDQNLYGPSF PQQVGDNEQF YEASSDHKWV  300
DGKDDCANVN DLSIFDDDIM SLLNASEGDF SLDLLGPVDG SNSQFPAASD FDQKDEAKAQ  360
YGASSSGSRE NLYPDSMVTD LPMDDNVGKR FGKFANMLGS YPAPPAMASE FPPTTGKSIA  420
ALSGPSQIRV TAGIVQLGDH SFTGNSDNWP LQKNGVFNLL LSFTVESNVS TKLIGFDDEP  480
ATTRVSTVPT VLRGGLYLFF VSAMILMLSF KVGSCIYSRS R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3664700.0AK366470.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2043F06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003570443.10.0PREDICTED: NAC domain-containing protein 78
TrEMBLM0V9M20.0M0V9M2_HORVD; Uncharacterized protein
STRINGMLOC_20905.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129312833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-25NAC domain containing protein 2